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Type :article
Subject :Q Science
Main Author :Keong, Bun Poh
Additional Authors :Rosmilah Misnan
Sinang, Som Cit
Title :Optimal preservation and storage regimes of total RNAs from different fish tissues
Place of Production :Tanjong Malim
Publisher :Fakulti Sains dan Matematik
Year of Publication :2019
Corporate Name :Universiti Pendidikan Sultan Idris
PDF Full Text :Login required to access this item.

Abstract : Universiti Pendidikan Sultan Idris
Standardized and optimized methods in preservation and storage of RNA samples on three different tissues were elucidated on fish tissues. The treatments used included excision of fresh tissues, preservation of tissues by immersing completely in RNAlater followed by immediate freezing at -80°C prior to RNA assays. Current data suggests that preserving fish tissues in RNAlater with subsequent storage at -80°C produced satisfactory amount of RNA from dorsal fin and gonad, but not from muscle tissues. The optimized method will provide an alternative storage method option and enables greater usage of RNAlater for preserving RNA from animal cells.

References

1. Auer, H., Mobley, J., Ayers, L., Bowen, J., Chuaqui, R., Johnson, L., … Ramirez, N. (2014). The effects of frozen tissue storage conditions on the integrity of RNA and protein. Biotechnic and Histochemistry : Official Publication of the Biological Stain Commission, 89(7), 518. doi: 10.3109/10520295.2014.904927

2. Bone, Q., Marshall, N. B., & Blaxter, J. H. S. (1995). Biology of fish. Retrieved June 05, 2019, from http://www.cichlid-forum.com/articles/biology_of_fish.php

3. Copois, V., Bibeau, F., Bascoul-Mollevi, C., Salvetat, N., Chalbos, P., Bareil, C., … Del Rio, M. (2007). Impact of RNA degradation on gene expression profiles: Assessment of different methods to reliably determine RNA quality. Journal of Biotechnology, 127(4), 549–559. doi: 10.1016/j. jbiotec.2006.07.032

4. Deng, M. Y., Wang, H., Ward, G. B., Beckham, T. R., & McKenna, T. S. (2005). Comparison of six RNA extraction methods for the detection of classical swine fever virus by real-time and conventional reverse transcription–PCR. Journal of Veterinary Diagnostic Investigation, 17(6), 574–578. doi: 10.1177/104063870501700609

5. Escobar, M. D., & Hunt, J. L. (2017). A cost-effective RNA extraction technique from animal cells and tissue using silica columns. Journal of Biological Methods, 4(2), 72. doi: 10.14440/jbm.2017.184

6. Gorokhova, E. (2005). Effects of preservation and storage of microcrustaceans in RNAlater on RNA and DNA degradation. Limnology and Oceanography: Methods, 3(2), 143–148. doi: 10.4319/lom.2005.3.143

7. Huang, J. D., Lee, M. F., & Chang, C. F. (2002). The morphology of gonadal tissue and male germ cells in the protandrous black porgy, Acanthopagrus schlegeli. Zoological Studies, 41(2), 216–226.

8. Junttila, S., Lim, K.-J., & Rudd, S. (2009). Optimization and comparison of different methods for RNA isolation for cDNA library construction from the reindeer lichen Cladonia rangiferina. BMC Research Notes, 2(1), 204. doi: 10.1186/1756-0500-2-204

9. Pesaro, M., Widmer, F., Nicollier, G., & Zeyer, J. (2003). Effects of freeze-thaw stress during soil storage on microbial communities and methidathion degradation. Soil Biology and Biochemistry, 35(8), 1049–1061. doi: 10.1016/ S0038-0717(03)00147-0

10. QIAGEN. (2006). RNAlater® handbook. Retrieved June 05, 2019, from https://www.qiagen.com/ us/resources/resourcedetail?id=38566945-e96b46a4-a287-ec026849da4b&lang=en QIAGEN. (2011). RT2 HT first strand handbook. Retrieved June 05, 2019, from https://www.google.com/url?sa=t&rct=j&q=&esrc=s&source=web&cd=2&cad=rja&uact=8&ved=2ahUKEwjMybCBkKXkAhVBmuYKHZ4YBHcQFjABegQIAxAC&url=https%3A%2F%2Fwww. qiagen.com%2Fmq%2Fresources%2Fdownload. aspx%3Fid%3D9082d0c7-844e-45be-96c0-d5f580ef595b%26lang%3Den&usg=AOvVaw1ZLM-JmGiT2k6TKxPKXuJ3

11. QIAGEN. (2012). RNeasy® mini handbook. Retrieved June 05, 2019, from http://www.bea.ki.se/ m documents/EN-RNeasy%20handbook.pdf

12. Ross, B. M., Knowler, J. T., & McCulloch, J. (1992). On the stability of messenger RNA and ribosomal RNA in the brains of control human subjects and patients with Alzheimer’s disease. Journal of Neurochemistry, 58(5), 1810–1819. doi: 10.1111/j.1471-4159.1992.tb10057.x

13. Shabihkhani, M., Lucey, G. M., Wei, B., Mareninov, S., Lou, J. J., Vinters, H. V., … Yong, W. H. (2014). The procurement, storage, and quality assurance of frozen blood and tissue biospecimens in pathology, biorepository, and biobank settings. Clinical Biochemistry, 47(4–5), 258–266. doi: 10.1016/j.clinbiochem.2014.01.002


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